<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article PUBLIC "-//NLM//DTD JATS (Z39.96) Journal Publishing DTD v1.2 20190208//EN" "http://jats.nlm.nih.gov/publishing/1.2/JATS-journalpublishing1.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" article-type="research-article" dtd-version="1.2" xml:lang="en">
    <front>
        <journal-meta>
            <journal-id journal-id-type="pmc">AAS Open Res</journal-id>
            <journal-title-group>
                <journal-title>AAS Open Research</journal-title>
            </journal-title-group>
            <issn pub-type="epub">2515-9321</issn>
            <publisher>
                <publisher-name>F1000 Research Limited</publisher-name>
                <publisher-loc>London, UK</publisher-loc>
            </publisher>
        </journal-meta>
        <article-meta>
            <article-id pub-id-type="doi">10.12688/aasopenres.12925.1</article-id>
            <article-categories>
                <subj-group subj-group-type="heading">
                    <subject>Research Article</subject>
                </subj-group>
                <subj-group>
                    <subject>Articles</subject>
                </subj-group>
            </article-categories>
            <title-group>
                <article-title>Association between CD4 T cell counts and the immune status among adult critically ill HIV-negative patients in intensive care units in Uganda</article-title>
                <fn-group content-type="pub-status">
                    <fn>
                        <p>[version 1; peer review: 1 approved, 2 approved with reservations]</p>
                    </fn>
                </fn-group>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author" corresp="yes">
                    <name>
                        <surname>Kavuma Mwanje</surname>
                        <given-names>Arthur</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Formal Analysis</role>
                    <role content-type="http://credit.niso.org/">Funding Acquisition</role>
                    <role content-type="http://credit.niso.org/">Investigation</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Project Administration</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <uri content-type="orcid">https://orcid.org/0000-0002-1249-3258</uri>
                    <xref ref-type="corresp" rid="c1">a</xref>
                    <xref ref-type="aff" rid="a1">1</xref>
                    <xref ref-type="aff" rid="a2">2</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Ejoku</surname>
                        <given-names>Joseph</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Project Administration</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <xref ref-type="aff" rid="a3">3</xref>
                    <xref ref-type="aff" rid="a4">4</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Ssemogerere</surname>
                        <given-names>Lameck</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <uri content-type="orcid">https://orcid.org/0000-0002-3117-1350</uri>
                    <xref ref-type="aff" rid="a1">1</xref>
                    <xref ref-type="aff" rid="a3">3</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Lubulwa</surname>
                        <given-names>Clare</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <xref ref-type="aff" rid="a4">4</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Namata</surname>
                        <given-names>Christine</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Kwizera</surname>
                        <given-names>Arthur</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Formal Analysis</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Wabule</surname>
                        <given-names>Agnes</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Formal Analysis</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Project Administration</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Okello</surname>
                        <given-names>Erasmus</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Kizito</surname>
                        <given-names>Samuel</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Formal Analysis</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Software</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <xref ref-type="aff" rid="a5">5</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Lubikire</surname>
                        <given-names>Aggrey</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <xref ref-type="aff" rid="a1">1</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Sendagire</surname>
                        <given-names>Cornelius</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Data Curation</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <xref ref-type="aff" rid="a3">3</xref>
                </contrib>
                <contrib contrib-type="author" corresp="no">
                    <name>
                        <surname>Andia Biraro</surname>
                        <given-names>Irene</given-names>
                    </name>
                    <role content-type="http://credit.niso.org/">Conceptualization</role>
                    <role content-type="http://credit.niso.org/">Methodology</role>
                    <role content-type="http://credit.niso.org/">Supervision</role>
                    <role content-type="http://credit.niso.org/">Validation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Original Draft Preparation</role>
                    <role content-type="http://credit.niso.org/">Writing &#x2013; Review &amp; Editing</role>
                    <uri content-type="orcid">https://orcid.org/0000-0002-8303-6046</uri>
                    <xref ref-type="aff" rid="a6">6</xref>
                    <xref ref-type="aff" rid="a7">7</xref>
                </contrib>
                <aff id="a1">
                    <label>1</label>Department of Anaesthesia, Makerere University, Kampala, 256, Uganda</aff>
                <aff id="a2">
                    <label>2</label>Department of Anaesthesia, Holy Cross Orthodox Hospital, Kampala, 256, Uganda</aff>
                <aff id="a3">
                    <label>3</label>Department of Anaesthesia, Uganda Heart Institute, Kampala, 256, Uganda</aff>
                <aff id="a4">
                    <label>4</label>Department of Anaesthesia, Mulago National Referral Hospital, Kampala, 256, Uganda</aff>
                <aff id="a5">
                    <label>5</label>Department of Clinical Epidemiology and Biostatistics, Makerere University, Kampala, 256, Uganda</aff>
                <aff id="a6">
                    <label>6</label>Medical Research Council, Uganda Virus Research-Institute Uganda Research Unit on AIDS, Kampala, 256, Uganda</aff>
                <aff id="a7">
                    <label>7</label>Department of Internal Medicine, Makerere University, Kampala, 256, Uganda</aff>
            </contrib-group>
            <author-notes>
                <corresp id="c1">
                    <label>a</label>
                    <email xlink:href="mailto:kart227@yahoo.com">kart227@yahoo.com</email>
                </corresp>
                <fn fn-type="conflict">
                    <p>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>8</day>
                <month>1</month>
                <year>2019</year>
            </pub-date>
            <pub-date pub-type="collection">
                <year>2019</year>
            </pub-date>
            <volume>2</volume>
            <elocation-id>2</elocation-id>
            <history>
                <date date-type="accepted">
                    <day>3</day>
                    <month>1</month>
                    <year>2019</year>
                </date>
            </history>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2019 Kavuma Mwanje A et al.</copyright-statement>
                <copyright-year>2019</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <self-uri content-type="pdf" xlink:href="https://openresearchafrica.org/articles/2-2/pdf"/>
            <abstract>
                <p>
                    <bold>Background:</bold> Cluster of differentiation 4 (CD4) T cells play a central role in regulation of adaptive T cell-mediated immune responses. Low CD4 T cell counts are not routinely reported as a marker of immune deficiency among HIV-negative individuals, as is the norm among their HIV positive counterparts. Despite evidence of mortality rates as high as 40% among Ugandan critically ill HIV-negative patients, the use of CD4 T cell counts as a measure of the immune status has never been explored among this population. This study assessed the immune status of adult critically ill HIV-negative patients admitted to Ugandan intensive care units (ICUs) using CD4 T cell count as a surrogate marker.</p>
                <p>
                    <bold>Methods:</bold> A multicentre prospective cohort was conducted between 1
                    <sup>st</sup> August 2017 and 1
                    <sup>st</sup> March 2018 at four Ugandan ICUs. A total of 130 critically ill HIV negative patients were consecutively enrolled into the study. Data on sociodemographics, clinical characteristics, critical illness scores, CD4 T cell counts were obtained at baseline and mortality at day 28.</p>
                <p>
                    <bold>Results:</bold> The mean age of patients was 45&#x00b1; 18 years (mean&#x00b1;SD) and majority (60.8%) were male. After a 28-day follow up, 71 [54.6%, 95% CI (45.9-63.3)] were found to have CD4 counts less than 500 cells/mm&#x00b3;, which were not found to be significantly associated with mortality at day 28, OR (95%) 1 (0.4&#x2013;2.4), p = 0.093. CD4 cell count receiver operator characteristic curve (ROC) area was 0.5195, comparable to APACHE II ROC area 0.5426 for predicting 24-hour mortality.</p>
                <p>
                    <bold>Conclusions:</bold> CD4 T cell counts were generally low among HIV-negative critically ill patients. Low CD4 T cells did not predict ICU mortality at day 28. CD4 T cell counts were not found to be inferior to APACHE II score in predicting 24 hour ICU mortality.</p>
            </abstract>
            <kwd-group kwd-group-type="author">
                <kwd>CD4 T cells</kwd>
                <kwd>HIV negative</kwd>
                <kwd>critically ill</kwd>
                <kwd>immune status</kwd>
            </kwd-group>
            <funding-group>
                <award-group id="fund-1" xlink:href="http://dx.doi.org/10.13039/501100011858">
                    <funding-source>African Academy of Sciences</funding-source>
                    <award-id>DEL-15-011</award-id>
                </award-group>
                <award-group id="fund-2" xlink:href="http://dx.doi.org/10.13039/100004440">
                    <funding-source>Wellcome Trust</funding-source>
                    <award-id>107742</award-id>
                </award-group>
                <funding-statement>KAM, NC and AK are supported through the DELTAS Africa Initiative grant #DEL-15-011 to THRiVE-2. The DELTAS Africa Initiative is an independent funding scheme of the African Academy of Sciences (AAS)&#x2019;s Alliance for Accelerating Excellence in Science in Africa (AESA) and supported by the New Partnership for Africa&#x2019;s Development Planning and Coordinating Agency (NEPAD Agency), with funding from the Wellcome Trust grant 107742 and the UK government. The views expressed in this publication are those of the authors and not necessarily those of AAS, NEPAD Agency, Wellcome Trust or the UK government.</funding-statement>
                <funding-statement>
                    <italic>The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.</italic>
                </funding-statement>
            </funding-group>
        </article-meta>
    </front>
    <body>
        <sec sec-type="intro">
            <title>Introduction</title>
            <p>Cluster of differentiation 4 (CD4) is a glycoprotein found on the surface of immune cells such as T helper cells and macrophages
                <sup>
                    <xref ref-type="bibr" rid="ref-1">1</xref>
                </sup>. If CD4 T cells become depleted, the body is left susceptible to a wide spectrum of viral and bacterial infections that it would otherwise have been able to fight
                <sup>
                    <xref ref-type="bibr" rid="ref-2">2</xref>
                </sup>. CD4 T cells play a central role in the cascade of events forming immune response to foreign antigen, hence monitoring their levels is necessary to understand the extent of immune deficiency
                <sup>
                    <xref ref-type="bibr" rid="ref-3">3</xref>
                </sup>. A normal CD4 T cell count in an adult is usually between 500 and 1500 cells/mm&#x00b3;
                <sup>
                    <xref ref-type="bibr" rid="ref-4">4</xref>
                </sup>. Low CD4 T cell levels are reported in HIV-positive patients as a marker of poor immune status and may fall to as low as zero cells in peripheral blood. Similarly, CD4 T cells may be suppressed among HIV negative patients that suffer from critical illnesses
                <sup>
                    <xref ref-type="bibr" rid="ref-5">5</xref>
                </sup>. CD4 T cell counts differ across different HIV-negative populations, due to a variety of factors that include environmental, immunological and genetic factors
                <sup>
                    <xref ref-type="bibr" rid="ref-6">6</xref>
                </sup>.</p>
            <p>Critical care has become an important area of the health sciences, leading to development of scoring systems to guide clinicians in estimating patients&#x2019; prognoses, and in particular the risk of mortality. The most frequently used scoring system is the Acute Physiology Age and Chronic Health Evaluation II (APACHE II)
                <sup>
                    <xref ref-type="bibr" rid="ref-7">7</xref>
                </sup> which predicts mortality in the first 24 hours of admission to ICU.</p>
            <p>Low CD4 T cell counts were associated with mortality among HIV patients admitted to African ICU
                <sup>
                    <xref ref-type="bibr" rid="ref-8">8</xref>
                </sup>. Surprisingly, very low CD4 T cell counts are fairly common among people without HIV, and are likely to be present among 40 and 70% of people admitted to ICUs
                <sup>
                    <xref ref-type="bibr" rid="ref-9">9</xref>
                </sup>.</p>
            <p>No such study had been conducted in Uganda before; hence, no available policies regarding use of CD4 T cell counts among critically ill HIV-negative patients from the Ugandan Ministry of Health.</p>
        </sec>
        <sec sec-type="methods">
            <title>Methods</title>
            <sec>
                <title>Study background</title>
                <p>We conducted a prospective cohort study between 1
                    <sup>st</sup> August 2017 and 1
                    <sup>st</sup> March 2018 at Mulago National Referral ICU, Uganda Heart Institute ICU, International Hospital Kampala ICU and Nakasero Hospital Limited ICU in Kampala city, Uganda. Baseline data on patients&#x2019; demographic variables (employment status, education level, family income, smoking, age, sex and ethnicity), admission diagnosis, CD4 T Cell counts and APACHE II scores were collected. We included adult HIV negative critically ill, APACHE II scored, medical/surgical ICU patients and excluded patients found admitted to ICU beyond 24 hours and those on immunosuppressant drugs such as steroids prior to admission. A total of 130 critically ill HIV-negative adults were enrolled into the study of which 127 participants gave written informed assent on behalf of their critically ill patients while 3 were waived of consent by the ethics committee because they had no proxies.  The sample size was calculated using the formula for sample size calculation for two groups with a continuous outcome as outlined in Designing Clinical Research by Hulley 
                    <italic toggle="yes">et al.</italic>
                    <sup>
                        <xref ref-type="bibr" rid="ref-10">10</xref>
                    </sup>.
                    <italic toggle="yes"/> We aimed for power of 80%, level of significance of 95%  and using mean estimates of CD4 from a study
                    <sup>
                        <xref ref-type="bibr" rid="ref-6">6</xref>
                    </sup>. All study participants were followed for 28 days and end of follow up survival and mortality data was collected.</p>
            </sec>
            <sec>
                <title>Patient assessment</title>
                <p>Referring to World Health Organization, we grouped CD4 levels into two; where CD4 above 500 cells/mm&#x00b3; signified immune competent or normal CD4 count and those with CD4 less than 500 cells/mm&#x00b3; reflecting low immunity.</p>
                <p>The APACHE II scores and blood draws for CD4 T cell counts were performed upon admission between 8 am and 10 am. Blood sampling followed a standard laboratory practice. Approximately 3 to 5 ml of blood were collected in K3/K2 EDTA vacutainers, labeled with the patient&#x2019;s identification, date and time of collection, and the name of the collecting personnel. To assess patients&#x2019; CD4 levels, BD FACSCalibur anticoagulated blood samples transported at ambient temperature (20&#x2013;25&#x00b0;C) was stained within 48 hours of draw and then analyzed within 6 hours of staining
                    <sup>
                        <xref ref-type="bibr" rid="ref-11">11</xref>
                    </sup>. Samples were analysed from a 4-star laboratory of Makerere-Mbarara University Joint AIDS Program. Sample transport was by hand delivery and no transport was done on non-testing days. A coding manual for laboratory results was developed for broken samples, insufficient, clotted, frozen, haemolysed blood, samples not been drawn in K3/K2 EDTA vacutainers and errors in laboratory procedures. </p>
                <p>Strict procedures for data management during the pre-analytical, analytical and post analytical phase of testing were conducted to ensure the reliable production and delivery of accurate test results. Laboratory equipment was calibrated daily and sample laboratory registers were used to record receipt of samples and the production and release of results on entry of test result form.</p>
                <p>The collection sites maintained the test request form. Testing laboratory had reliable systems for receiving and processing result data with uniform basic data handling, storage and reporting standards. The testing laboratory maintained records of result data for defined periods, to allow repeat reporting of lost test results, as well as aggregation for monitoring and evaluation or other research purposes. The testing laboratory also ensured reliable and rapid delivery of results.</p>
            </sec>
            <sec>
                <title>APACHE II questionnaire</title>
                <p>The questionnaires were cross-checked by the principal investigator (PI) to ensure completeness before leaving the study site and periodically, the PI arranged a meeting with the assistants to validate data. Computer in-built checks reinforced data completeness. Quantitative data was double-entered to ensure correctness of data entered. According to WHO guidelines, the questionnaire was translated into Luganda a local dialect and back-translated into English by K.A.M.</p>
                <p>To address potential sources of bias, the PI and critical care nurses (research assistants) sampled the participants by drawing blood and filling the questionnaires that were retained at the study sites. The laboratory technician (research assistant) transported all samples with only a laboratory request form and did not participate in drawing blood from the patients, only K.A.M. accessed the study results and strictly 130 participants were recruited and all completed a 28-day follow-up.</p>
            </sec>
            <sec>
                <title>Ethical approval</title>
                <p>This study was approved by Research and Ethics Committee of Makerere University. A waiver of requirement for consent for unconscious patients without proxies was obtained with a reference number 2017-095. Final approval was granted by Uganda National Council for Science and Technology with a reference number HS104ES.</p>
            </sec>
            <sec>
                <title>Data management and statistical analysis</title>
                <p>An electronic database was created using 
                    <ext-link ext-link-type="uri" xlink:href="https://www.epidata.dk/">EpiData</ext-link> version 3.1 to enter the raw data from the questionnaires. The data was then transferred to STATA version 14.1 for analysis. In determining the CD4 T cell counts among the study participants, we presented the mean CD4 count with its corresponding standard deviation since it was normally distributed. In addition, we presented the CD4 as a categorized variable with frequencies (and percentages) for the various cutoffs with the corresponding 95% confidence intervals of the proportions.</p>
                <p>In order to determine the relationship between CD4 T cell counts and 28-day ICU mortality, we performed multivariate logistic regression with CD4 count as the main predictor and 28-day mortality as the outcome. Prior to performing the multivariate logistic regression models, we performed bivariate analysis and all the variables with a p-value of 0.2 or less were included in the multivariate model.</p>
                <p>Multivariate logistic regression was performed to determine how the CD4 jointly with other variables was associated with 28-day mortality. The variables were entered into a stepwise logistic model. Significance was set at p-value of 0.05 or less. The goodness of fit of the final model was tested using the Hosmer &amp; Lemeshow goodness of fit, testing the null hypothesis that the final model adequately fits the data.</p>
                <p>To assess the feasibility of using CD4 T cell counts to predict 24-hour mortality, as compared to APACHE II score, we compared the area under the Receiver Operator Characteristic Curves (ROC) between CD4 and APACHE II in predicting mortality. Prior to generating the ROC, we generated the sensitivities and specificities for the different cutoffs for both CD4 count and APACHE II.  The ROC was then generated with y-axis being sensitivity and the x-axis being 1-specificity.</p>
            </sec>
        </sec>
        <sec sec-type="results">
            <title>Results</title>
            <sec>
                <title>Patient characteristics</title>
                <p>More than half (53.9%) of the participants were recruited from MNRH followed by IHK (24.6%), NHL (19.2%) and lastly UHI (2.3%). Non-smoking self-employed black males dominated the study population at a mean age of 45.2&#x00b1;18.3 (mean&#x00b1;SD) and a family income above $1 as shown in 
                    <xref ref-type="table" rid="T1">Table 1</xref>. The major indication for admitting to ICU was postoperative high critical care requirements (46.2%), whilst the least common was urinary tract infection (UTI) (0.8%). Details are shown in 
                    <xref ref-type="table" rid="T2">Table 2</xref>. All raw data are available on 
                    <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.17605/OSF.IO/JBMKP">OSF</ext-link>
                    <sup>
                        <xref ref-type="bibr" rid="ref-12">12</xref>
                    </sup>.</p>
                <table-wrap id="T1" orientation="portrait" position="anchor">
                    <label>Table 1. </label>
                    <caption>
                        <title>Baseline demographic and clinical characteristics among critically ill HIV negative patients in Ugandan ICUs.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="1">Variable</th>
                                <th align="left" colspan="1" rowspan="1">Patients, N (%)
                                    <xref ref-type="other" rid="FN1">*</xref>
                                </th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Hospital </td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;IHK</td>
                                <td align="left" colspan="1" rowspan="1">32 (24.6)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;MNRH</td>
                                <td align="left" colspan="1" rowspan="1">70 (53.9)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;NHL</td>
                                <td align="left" colspan="1" rowspan="1">25 (19.2)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;UHI</td>
                                <td align="left" colspan="1" rowspan="1">3 (2.3)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Gender </td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Male </td>
                                <td align="left" colspan="1" rowspan="1">79 (60.8)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Female </td>
                                <td align="left" colspan="1" rowspan="1">50 (38.5)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Age in years
                                    <xref ref-type="other" rid="FN1">&#x2020;</xref>
                                </td>
                                <td align="left" colspan="1" rowspan="1">45&#x00b1;18</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Ethnicity </td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Black </td>
                                <td align="left" colspan="1" rowspan="1">122 (93.8)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Asian </td>
                                <td align="left" colspan="1" rowspan="1">3 (2.3)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Caucasian </td>
                                <td align="left" colspan="1" rowspan="1">2 (1.5)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Not disclosed </td>
                                <td align="left" colspan="1" rowspan="1">3 (2.3)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Family income </td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Above $1 a day</td>
                                <td align="left" colspan="1" rowspan="1">65 (50)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Below $1 a day </td>
                                <td align="left" colspan="1" rowspan="1">59 (45.4)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Not disclosed </td>
                                <td align="left" colspan="1" rowspan="1">6 (4.6)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Employment status </td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Professional Job </td>
                                <td align="left" colspan="1" rowspan="1">35 (26.9)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Self employed </td>
                                <td align="left" colspan="1" rowspan="1">60 (46.2)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Unemployed </td>
                                <td align="left" colspan="1" rowspan="1">31 (23.9)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Others</td>
                                <td align="left" colspan="1" rowspan="1">4 (3)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Education status </td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0; University/tertiary </td>
                                <td align="left" colspan="1" rowspan="1">54 (41.5)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;  Secondary </td>
                                <td align="left" colspan="1" rowspan="1">33 (25.4)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;  Primary </td>
                                <td align="left" colspan="1" rowspan="1">34 (26.2)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;  None </td>
                                <td align="left" colspan="1" rowspan="1">5 (3.9)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;  Not disclosed </td>
                                <td align="left" colspan="1" rowspan="1">4 (3.1)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Smoking status </td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0; Smoker </td>
                                <td align="left" colspan="1" rowspan="1">9 (6.9)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0; Non-smoker </td>
                                <td align="left" colspan="1" rowspan="1">115 (88.5)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0; Not disclosed </td>
                                <td align="left" colspan="1" rowspan="1">6 (4.6)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">CD4 cell count time </td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;At 0800 h</td>
                                <td align="left" colspan="1" rowspan="1">90 (69.2)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;At 1000 h</td>
                                <td align="left" colspan="1" rowspan="1">37 (28.5)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Others </td>
                                <td align="left" colspan="1" rowspan="1">3 (2.3)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Time to death (days)
                                    <xref ref-type="other" rid="FN1">&#x2020;</xref>
                                </td>
                                <td align="left" colspan="1" rowspan="1">6.6&#x00b1;6.5</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Status at 28 days </td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Alive </td>
                                <td align="left" colspan="1" rowspan="1">93 (71.5)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Dead </td>
                                <td align="left" colspan="1" rowspan="1">37 (28.5)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Admission source </td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Operating theatre </td>
                                <td align="left" colspan="1" rowspan="1">48 (36.9)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Medical wards </td>
                                <td align="left" colspan="1" rowspan="1">16 (12.3)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Obstetrics </td>
                                <td align="left" colspan="1" rowspan="1">2 (1.5)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Surgical wards </td>
                                <td align="left" colspan="1" rowspan="1">12 (9.2)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Private wing </td>
                                <td align="left" colspan="1" rowspan="1">3 (2.3)</td>
                            </tr>
                        </tbody>
                    </table>
                    <table-wrap-foot>
                        <fn>
                            <p id="FN1">*Unless indicated. &#x2020;Data given as mean &#x00b1; standard deviation.</p>
                        </fn>
                    </table-wrap-foot>
                </table-wrap>
                <table-wrap id="T2" orientation="portrait" position="anchor">
                    <label>Table 2. </label>
                    <caption>
                        <title>Showing indications for admission to ICU among critically ill HIV negative patients in Ugandan ICUs.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="1">Variable</th>
                                <th align="left" colspan="1" rowspan="1">Patients, n (%)</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Post-operative care </td>
                                <td align="left" colspan="1" rowspan="1">60 (46.2)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1"> Central nervous system</td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Stroke </td>
                                <td align="left" colspan="1" rowspan="1">10 (7.7)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Seizures </td>
                                <td align="left" colspan="1" rowspan="1">12 (9.2)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Head injury </td>
                                <td align="left" colspan="1" rowspan="1">29 (22.3)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Altered mental status (unknown cause)</td>
                                <td align="left" colspan="1" rowspan="1">14 (10.8)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Cervical spine injury </td>
                                <td align="left" colspan="1" rowspan="1">2 (1.5)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Other neurological indication
                                    <sup>
                                        <xref ref-type="other" rid="FN2">1</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1">9 (6.9)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Cardiovascular </td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Heart failure with cardiogenic shock </td>
                                <td align="left" colspan="1" rowspan="1">4 (3.1)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Post cardiac arrest </td>
                                <td align="left" colspan="1" rowspan="1">8 (6.2)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Acute MI</td>
                                <td align="left" colspan="1" rowspan="1">1 (0.8)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Others
                                    <sup>
                                        <xref ref-type="other" rid="FN2">2</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1">5 (3.8)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Respiratory </td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;General respiratory distress</td>
                                <td align="left" colspan="1" rowspan="1">35 (26.9)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Severe pneumonia </td>
                                <td align="left" colspan="1" rowspan="1">8 (6.2)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Others
                                    <sup>
                                        <xref ref-type="other" rid="FN2">3</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1">14 (10.8)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Gastrointestinal </td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0; Gastro intestinal bleeding </td>
                                <td align="left" colspan="1" rowspan="1">6 (4.6)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0; Peritonitis </td>
                                <td align="left" colspan="1" rowspan="1">7 (5.4)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0; Other
                                    <sup>
                                        <xref ref-type="other" rid="FN2">4</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1">5 (3.9)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Renal </td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0; Acute renal failure </td>
                                <td align="left" colspan="1" rowspan="1">15 (11.5)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Infections </td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0; CNS infections </td>
                                <td align="left" colspan="1" rowspan="1">3 (2.3)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0; Cardiac </td>
                                <td align="left" colspan="1" rowspan="1">2 (1.5)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0; Respiratory infections </td>
                                <td align="left" colspan="1" rowspan="1">19 (14.6)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0; Urinary tract infections </td>
                                <td align="left" colspan="1" rowspan="1">1 (0.8)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0; Gastrointestinal infections </td>
                                <td align="left" colspan="1" rowspan="1">7 (5.3)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0; Soft tissue infections </td>
                                <td align="left" colspan="1" rowspan="1">2 (1.5)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0; Blood stream</td>
                                <td align="left" colspan="1" rowspan="1">8 (6.2)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0; Sepsis </td>
                                <td align="left" colspan="1" rowspan="1">26 (20)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Malnutrition </td>
                                <td align="left" colspan="1" rowspan="1">6 (4.6)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Tumors
                                    <sup>
                                        <xref ref-type="other" rid="FN2">5</xref>
                                    </sup>
                                </td>
                                <td align="left" colspan="1" rowspan="1">7 (5.4)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Trauma surgery </td>
                                <td align="left" colspan="1" rowspan="1">19 (14.6)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Scheduled surgery </td>
                                <td align="left" colspan="1" rowspan="1">18 (13.9)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Emergency surgery </td>
                                <td align="left" colspan="1" rowspan="1">16 (12.3)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Post-partum hemorrhage </td>
                                <td align="left" colspan="1" rowspan="1">3 (2.3)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Other indications </td>
                                <td align="left" colspan="1" rowspan="1">6 (4.6)</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Comorbidities </td>
                                <td align="left" colspan="1" rowspan="1">12(9.2)</td>
                            </tr>
                        </tbody>
                    </table>
                    <table-wrap-foot>
                        <fn>
                            <p id="FN2">
                                <sup>1</sup>Neurological diseases include brain tumors, cerebellar lesion. 
                                <sup>2</sup>Cardiac diseases include arrhythmias, pericardial effusion and myoma. 
                                <sup>3</sup>Respiratory diseases include aspiration pneumonia, bilateral pneumothorax, pulmonary embolism, pulmonary edema and other forms of chest trauma. 
                                <sup>4</sup>Gastrointestinal diseases include intestinal obstruction, liver disease, cholelithiasis, and hepatitis, Other indications include hemorrhage, burst abdomen, drug toxicity, electrolyte imbalance, sick sinus syndrome. 
                                <sup>5</sup>Include brain and lung tumors.</p>
                        </fn>
                    </table-wrap-foot>
                </table-wrap>
            </sec>
            <sec>
                <title>CD4 T cell counts among critically ill HIV-negative patients</title>
                <p>Overall 130 CD4 tests were carried out, of which 71 [54.6%, 95% CI (45.9-63.3)] were low (less than 500 cells/mm&#x00b3;). The mean CD4 count was 494.4&#x00b1;282 cells/mm&#x00b3; (mean&#x00b1;SD), and the lowest count was 50 cells/mm&#x00b3;. Other details are shown in 
                    <xref ref-type="table" rid="T3">Table 3</xref>. There was no significant association in mortality outcome between those who had normal (CD4 &#x2265;500 cells/mm&#x00b3;) and low (CD4 &lt;500 cells/mm&#x00b3;) CD4 counts (p = 0.64). Other details are shown in 
                    <xref ref-type="table" rid="T4">Table 4</xref>.</p>
                <table-wrap id="T3" orientation="portrait" position="anchor">
                    <label>Table 3. </label>
                    <caption>
                        <title>CD4 T cell counts among critically ill HIV-negative patients in Ugandan ICUs.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="1">CD4 count, cells/mm
                                    <sup>3</sup>
                                </th>
                                <th align="left" colspan="1" rowspan="1">Patients, n (%)</th>
                                <th align="left" colspan="1" rowspan="1">95 % CI</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Less than 100</td>
                                <td align="left" colspan="1" rowspan="1">4 (3.1)</td>
                                <td align="left" colspan="1" rowspan="1">0-6</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">100-499</td>
                                <td align="left" colspan="1" rowspan="1">67 (51.5)</td>
                                <td align="left" colspan="1" rowspan="1">42.8-60.3</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">500 and above </td>
                                <td align="left" colspan="1" rowspan="1">59 (45.4)</td>
                                <td align="left" colspan="1" rowspan="1">36.9-54.1</td>
                            </tr>
                        </tbody>
                    </table>
                </table-wrap>
                <table-wrap id="T4" orientation="portrait" position="anchor">
                    <label>Table 4. </label>
                    <caption>
                        <title>Normal and low CD4 T cell counts among critically ill HIV negative patients in Ugandan ICUs.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="2" valign="top">Variable</th>
                                <th align="center" colspan="2" rowspan="1">CD4 count (cells/mm
                                    <sup>3</sup>)</th>
                                <th align="left" colspan="1" rowspan="2" valign="top">P value
                                    <xref ref-type="other" rid="FN3">*</xref>
                                </th>
                            </tr>
                            <tr>
                                <th align="left" colspan="1" rowspan="1">Normal &#x2265; 500
                                    <break/>(N=59)</th>
                                <th align="left" colspan="1" rowspan="1">Low &lt; 500
                                    <break/>(N=71)</th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Age, years
                                    <xref ref-type="other" rid="FN3">&#x2020;</xref>
                                </td>
                                <td align="left" colspan="1" rowspan="1">45.2&#x00b1;19.7</td>
                                <td align="left" colspan="1" rowspan="1">45.2&#x00b1;17.3</td>
                                <td align="left" colspan="1" rowspan="1">0.99</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Outcome
                                    <xref ref-type="other" rid="FN3">&#x2021;</xref>
                                </td>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;Alive </td>
                                <td align="left" colspan="1" rowspan="1">41 (69.5)</td>
                                <td align="left" colspan="1" rowspan="1">52 (73.2)</td>
                                <td align="left" colspan="1" rowspan="1">0.64</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;Dead </td>
                                <td align="left" colspan="1" rowspan="1">18 (30.5)</td>
                                <td align="left" colspan="1" rowspan="1">19 (26.8)</td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Time to death, days
                                    <xref ref-type="other" rid="FN3">&#x2020;</xref>
                                </td>
                                <td align="left" colspan="1" rowspan="1">6.4&#x00b1;6.6</td>
                                <td align="left" colspan="1" rowspan="1">6.7&#x00b1;6.6</td>
                                <td align="left" colspan="1" rowspan="1">0.91</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">ICU stay (survivors)
                                    <xref ref-type="other" rid="FN3">&#x2020;</xref>
                                </td>
                                <td align="left" colspan="1" rowspan="1">10.8&#x00b1;9.6</td>
                                <td align="left" colspan="1" rowspan="1">7.6&#x00b1;7.7</td>
                                <td align="left" colspan="1" rowspan="1">0.077</td>
                            </tr>
                        </tbody>
                    </table>
                    <table-wrap-foot>
                        <fn>
                            <p id="FN3">*For outcome, chi-squared test was used; for age, ICU stay and time to death, Student&#x2019;s t-test was used. &#x2020;Data given as mean&#x00b1;SD. &#x2021;Data given as n (%).</p>
                        </fn>
                    </table-wrap-foot>
                </table-wrap>
            </sec>
            <sec>
                <title>Relationship between CD4 T cell counts and 28-day mortality</title>
                <p>At bivariate analysis, smoking, admitting a patient from another hospital, ICUs for hospitals MNRH, NHL and UHI had a strong statistically significant association with mortality at day 28. At multivariate analysis, abnormal CD4 count was not found to be significantly associated with mortality at day 28 in our population OR (95%) 1 (0.4&#x2013;2.4) p = 0.093. Other details are shown in 
                    <xref ref-type="table" rid="T5">Table 5</xref>.</p>
                <table-wrap id="T5" orientation="portrait" position="anchor">
                    <label>Table 5. </label>
                    <caption>
                        <title>Multivariate analysis for relationship between CD4 and 28-day mortality among critically ill HIV negative patients admitted to ICUs in Kampala.</title>
                    </caption>
                    <table content-type="article-table" frame="hsides">
                        <thead>
                            <tr>
                                <th align="left" colspan="1" rowspan="1">Variable </th>
                                <th align="left" colspan="1" rowspan="1">28-day mortality, n/N (%)</th>
                                <th align="left" colspan="1" rowspan="1">aOR (95%)</th>
                                <th align="left" colspan="1" rowspan="1">P value </th>
                            </tr>
                        </thead>
                        <tbody>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Age</td>
                                <td colspan="1" rowspan="1"/>
                                <td align="left" colspan="1" rowspan="1">0.2 (0-1.4)</td>
                                <td align="left" colspan="1" rowspan="1">0.093</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">CD4 count</td>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Normal (&#x2265;500 cells/mm
                                    <sup>3</sup>) </td>
                                <td align="left" colspan="1" rowspan="1">18/59 (30.5)</td>
                                <td align="left" colspan="1" rowspan="1">1</td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Low (&lt;500 cells/mm
                                    <sup>3</sup>)</td>
                                <td align="left" colspan="1" rowspan="1">19/71 (26.8)</td>
                                <td align="left" colspan="1" rowspan="1">1 (0.4-2.4)</td>
                                <td align="left" colspan="1" rowspan="1">0.990</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1"> Head injury</td>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;No</td>
                                <td align="left" colspan="1" rowspan="1">25/101 (24.8)</td>
                                <td align="left" colspan="1" rowspan="1">1</td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Yes</td>
                                <td align="left" colspan="1" rowspan="1">12/29 (41.4)</td>
                                <td align="left" colspan="1" rowspan="1">3.1 (1.1-8.8)</td>
                                <td align="left" colspan="1" rowspan="1">0.033</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Sepsis</td>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0; No</td>
                                <td align="left" colspan="1" rowspan="1">27/104 (26)</td>
                                <td align="left" colspan="1" rowspan="1">1</td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Yes</td>
                                <td align="left" colspan="1" rowspan="1">10/26 (38.5)</td>
                                <td align="left" colspan="1" rowspan="1">1.7 (0.6-5)</td>
                                <td align="left" colspan="1" rowspan="1">0.338</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Gastrointestinal bleeding</td>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;No</td>
                                <td align="left" colspan="1" rowspan="1">3/6 (50)</td>
                                <td align="left" colspan="1" rowspan="1">1</td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Yes</td>
                                <td align="left" colspan="1" rowspan="1">3/6 (50)</td>
                                <td align="left" colspan="1" rowspan="1">3.7 (0.8-23.3)</td>
                                <td align="left" colspan="1" rowspan="1">0.167</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Elective surgery</td>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;No</td>
                                <td align="left" colspan="1" rowspan="1">36/112 (32.1)</td>
                                <td align="left" colspan="1" rowspan="1">1</td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Yes</td>
                                <td align="left" colspan="1" rowspan="1">1/18 (5.6)</td>
                                <td align="left" colspan="1" rowspan="1">0.2 (0-1.4)</td>
                                <td align="left" colspan="1" rowspan="1">0.093</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">Admission source</td>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Operating theatre</td>
                                <td align="left" colspan="1" rowspan="1">10/48 (20.8)</td>
                                <td align="left" colspan="1" rowspan="1">1</td>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Medical wards</td>
                                <td align="left" colspan="1" rowspan="1">5/16 (31.3)</td>
                                <td colspan="1" rowspan="1"/>
                                <td colspan="1" rowspan="1"/>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Obstetrics</td>
                                <td align="left" colspan="1" rowspan="1">1/2 (50)</td>
                                <td align="left" colspan="1" rowspan="1">4.5 (0.2-85.1)</td>
                                <td align="left" colspan="1" rowspan="1">0.311</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Surgical wards</td>
                                <td align="left" colspan="1" rowspan="1">4/12 (33.3)</td>
                                <td align="left" colspan="1" rowspan="1">1.2 (0.2-6.2)</td>
                                <td align="left" colspan="1" rowspan="1">0.830</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;A&amp;E</td>
                                <td align="left" colspan="1" rowspan="1">12/42 (28.6)</td>
                                <td align="left" colspan="1" rowspan="1">0.8 (0.3-2.4)</td>
                                <td align="left" colspan="1" rowspan="1">0.716</td>
                            </tr>
                            <tr>
                                <td align="left" colspan="1" rowspan="1">&#x00a0;&#x00a0;&#x00a0;&#x00a0;&#x00a0;Another hospital</td>
                                <td align="left" colspan="1" rowspan="1">5/16 (31.3)</td>
                                <td align="left" colspan="1" rowspan="1">8.5 (1.2-55.3)</td>
                                <td align="left" colspan="1" rowspan="1">0.026</td>
                            </tr>
                        </tbody>
                    </table>
                    <table-wrap-foot>
                        <fn>
                            <p>aOR, adjusted odds ratio. In the model above, we adjusted for hospital, reasons for ICU admission, admission source and smoking history.</p>
                        </fn>
                    </table-wrap-foot>
                </table-wrap>
            </sec>
            <sec>
                <title>Feasibility of using CD4 T cell counts to predict 24-hour mortality as compared to APACHE II score</title>
                <p>From the receiver operator characteristic curves for comparing CD4 cell count and APACHE II score in predicting mortality, the area under the curve for the two graphs was comparable (this signified that CD4 count could be as good as APACHE II score). However, both graphs demonstrated very low area under the curve (the closer to 1 the area is, the more diagnostically accurate the curve). Therefore, the data signified that both APACHE II and CD4 were not good predictors of the outcome, despite being comparable (
                    <xref ref-type="fig" rid="f1">Figure 1</xref>).</p>
                <fig fig-type="figure" id="f1" orientation="portrait" position="float">
                    <label>Figure 1. </label>
                    <caption>
                        <title>Receiver operator characteristic curve showing the feasibility of using CD4 cell counts to predict 24-hour mortality as compared to APACHE II score among critically ill HIV-negative patients.</title>
                    </caption>
                    <graphic orientation="portrait" position="float" xlink:href="https://openresearchafrica-files.f1000.com/manuscripts/13997/e84597aa-45f6-408b-99a2-bb4597885ef2_figure1.gif"/>
                </fig>
            </sec>
        </sec>
        <sec sec-type="discussion">
            <title>Discussion</title>
            <sec>
                <title>Demographics and clinical characteristics</title>
                <p>To our knowledge, this multicenter cohort study is the first report to discuss the immune status of critically ill HIV-negative patients admitted to Ugandan ICUs using CD4 T cell count as a surrogate marker. Almost all participants were black, of African descent and non-smokers, because black Africans, who rarely smoke, dominated the study population.</p>
                <p>Most admissions from all the four ICUs were surgical cases and those requiring high postoperative care contributed the highest number of participants while the least was due to UTI. This is because MNRH is the referral center for most critical patients and strictly to mention the trauma patients. The same happened to UHI ICU that admitted mostly surgical cases.</p>
                <p>In our study, we found that more than half of the participants had low CD4 T cell counts This may have been caused by critical illness that led to production of cortisol. This in turn may have suppressed the production of CD4 T cells. Our findings agree with a study conducted in nine consecutive patients admitted to the ICU with sepsis in Japan, whose CD4 cells were clearly reduced below 500 cells/mm&#x00b3; and remained at that level for entire 4 weeks
                    <sup>
                        <xref ref-type="bibr" rid="ref-13">13</xref>
                    </sup>. These findings are also in agreement with a study conducted in HIV-negative Senegalese individuals, which found that CD4 cell counts varied in HIV-negative individuals
                    <sup>
                        <xref ref-type="bibr" rid="ref-6">6</xref>
                    </sup>. Though our study population was purely HIV negative, we found that more than 50% of the participants had low CD4 cell counts, with four participants having their CD4 cell counts as low as less than 50 cells/mm&#x00b3; and six participants having counts less than 200 cells/mm&#x00b3;, values considered to indicate AIDS in patients living with HIV. Hence critical illness alone, without HIV infection, can present a picture that resembles that of AIDS in HIV-negative critically ill patients.</p>
                <p>We did not find a statistically significant association between CD4 T cell counts and ICU mortality at day 28 among critically ill HIV-negative patients in our population. This is consistent with a study conducted by Feeney 
                    <italic toggle="yes">et al</italic>., which did not find whether low CD4 T cell counts were associated with a poor prognosis
                    <sup>
                        <xref ref-type="bibr" rid="ref-9">9</xref>
                    </sup>. The reason why this American study agrees with our findings could be entirely attributable to the sample size that is almost similar in both studies. However, our results contradict with other studies that have shown that septic patients with loss of CD4 T cells have a higher mortality
                    <sup>
                        <xref ref-type="bibr" rid="ref-14">14</xref>
                    </sup>. It is also in contrast with a study conducted in 2007, which showed that low CD4 T cell counts were associated with death
                    <sup>
                        <xref ref-type="bibr" rid="ref-14">14</xref>
                    </sup>. Our findings could be ascribed to the fact that CD4 T cells are a surrogate marker of the many immune cells. Hence, measuring CD4 alone could not yield reliable information to predict mortality. Another reason for the lack of statistical significance observed would be due to the sample size and short-term follow-up that may be were not adequate to give dependable results. It is also prudent to note that CD4 T cells were only sampled once, hence making it hard to track the exact CD4 cells at the time of the patient&#x2019;s demise.</p>
                <p>Both high APACHE II and low CD4 count could predict a 24-hour mortality in our population; however, despite being comparable, both were not good predictors of mortality. This is in line with a study conducted in 2000, where elevated APACHE II score remained a significantly negative predictor of survival at 28-day mortality
                    <sup>
                        <xref ref-type="bibr" rid="ref-15">15</xref>
                    </sup>. It also concurs with a study conducted in 2015 that reported that the median APACHE II of 25 predicted greater than 50% mortality
                    <sup>
                        <xref ref-type="bibr" rid="ref-8">8</xref>
                    </sup>. The latter leaves a benefit of doubt, as the study did not report that mortality would be 100%. However it is in contrast with a study done in 1995 that did not find any relationship between CD4 counts and APACHE II score, predicted mortality rate, or survival rate
                    <sup>
                        <xref ref-type="bibr" rid="ref-9">9</xref>
                    </sup>.</p>
            </sec>
        </sec>
        <sec sec-type="conclusions">
            <title>Conclusion</title>
            <p>From our study, we conclude that CD4 T cell counts were generally low among HIV-negative critically ill patients and recommend that this indicator should be incorporated onto the panel of baseline investigations in this group of patients. We also established that low CD4 cells did not predict mortality at day 28 in our study population, although it would predict 24-hour mortality and was not inferior to prediction using APACHE II score. Hence, we suggest the use of CD4 T Cell counts in resource constrained setup to help in directing proper use of resources. Critically ill patients with low CD4 T cell counts should be supplemented with immunoadjuvant therapy to restore their immune system and also prevent loss of functional T helper cells as these play a major role in defending the body against pathogens. Further multinational studies on serial CD4 sampling until patients&#x2019; demise and a longer follow-up period are required.</p>
        </sec>
        <sec>
            <title>Data availability</title>
            <p>Raw data associated with this study are available on OSF in csv and dta formats. DOI: 
                <ext-link ext-link-type="uri" xlink:href="https://dx.doi.org/10.17605/OSF.IO/JBMKP">https://doi.org/10.17605/OSF.IO/JBMKP</ext-link>
                <sup>
                    <xref ref-type="bibr" rid="ref-12">12</xref>
                </sup>.</p>
            <p>Data are available under the terms of the 
                <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/publicdomain/zero/1.0/">Creative Commons Zero "No rights reserved" data waiver</ext-link> (CC0 1.0 Public domain dedication).</p>
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    <sub-article article-type="reviewer-report" id="report26948">
        <front-stub>
            <article-id pub-id-type="doi">10.21956/aasopenres.13997.r26948</article-id>
            <title-group>
                <article-title>Reviewer response for version 1</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Wade</surname>
                        <given-names>Djibril</given-names>
                    </name>
                    <xref ref-type="aff" rid="r26948a1">1</xref>
                    <role>Referee</role>
                    <uri content-type="orcid">https://orcid.org/0000-0002-1321-365X</uri>
                </contrib>
                <aff id="r26948a1">
                    <label>1</label>IRESSEF (Institute of Research in Health, Epidemiological Surveillance and Training), Dakar, Senegal</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>5</day>
                <month>7</month>
                <year>2019</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2019 Wade D</copyright-statement>
                <copyright-year>2019</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport26948" related-article-type="peer-reviewed-article" xlink:href="10.12688/aasopenres.12925.1"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>approve-with-reservations</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>The article is well written and easily understandable. It deals with the use of CD4 T-cell counts as a surrogate marker for 28 days mortality in HIV negative patients which is really interesting and will bring a new usage of the CD4 T-cell count which was mainly used to monitor immune system monitoring in HIV-infected patients.</p>
            <p> </p>
            <p> I would just recommend adding reference to the studies&#x00a0;that established the normal values of CD4 T-cell counts in the Ugandan population (Nanzigu 
                <italic>et al.</italic>, 2011
                <sup>
                    <xref ref-type="bibr" rid="rep-ref-26948-1">1</xref>
                </sup>) where the 95% reference ranges for absolute CD4 count was 418 - 2105 cells/&#x00b5;L. In some countries mainly in resource-limited settings, people are exposed to a variety of infectious diseases and other conditions including stress that may affect CD4 count, and this is highly expected in patients attending ICUs. Given the normal values of CD4 counts in Uganda, my final recommendation will be to please adjust what you considered low CD4 counts.</p>
            <p>Is the work clearly and accurately presented and does it cite the current literature?</p>
            <p>Yes</p>
            <p>If applicable, is the statistical analysis and its interpretation appropriate?</p>
            <p>I cannot comment. A qualified statistician is required.</p>
            <p>Are all the source data underlying the results available to ensure full reproducibility?</p>
            <p>Yes</p>
            <p>Is the study design appropriate and is the work technically sound?</p>
            <p>Yes</p>
            <p>Are the conclusions drawn adequately supported by the results?</p>
            <p>Yes</p>
            <p>Are sufficient details of methods and analysis provided to allow replication by others?</p>
            <p>Yes</p>
            <p>Reviewer Expertise:</p>
            <p>Immunology</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard, however I have significant reservations, as outlined above.</p>
        </body>
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    <sub-article article-type="reviewer-report" id="report26831">
        <front-stub>
            <article-id pub-id-type="doi">10.21956/aasopenres.13997.r26831</article-id>
            <title-group>
                <article-title>Reviewer response for version 1</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>Barugahare</surname>
                        <given-names>Banson</given-names>
                    </name>
                    <xref ref-type="aff" rid="r26831a1">1</xref>
                    <role>Referee</role>
                </contrib>
                <aff id="r26831a1">
                    <label>1</label>Faculty of Science and Education, Busitema University, Tororo, Uganda</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>16</day>
                <month>4</month>
                <year>2019</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2019 Barugahare B</copyright-statement>
                <copyright-year>2019</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport26831" related-article-type="peer-reviewed-article" xlink:href="10.12688/aasopenres.12925.1"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>approve</meta-value>
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        </front-stub>
        <body>
            <p>I have reviewed the manuscript 
                <italic>&#x201c;Association between CD4 T cell counts and the immune status among adult critically ill HIV-negative patients in intensive care units in Uganda&#x201d;. </italic>The finding that CD4 T cell counts were generally low among HIV-negative critically ill patients but did not predict ICU mortality is fundamental. This result calls for further immunological studies. Nevertheless, I would like to recommend the authors to review and make reference to the previous Ugandan population based CD4 normal value studies. This information is available from a couple of studies by Tugume 
                <italic>et al.</italic> (1995
                <sup>
                    <xref ref-type="bibr" rid="rep-ref-26831-1">1</xref>
                </sup>) and Lugada 
                <italic>et al.</italic> (2004
                <sup>
                    <xref ref-type="bibr" rid="rep-ref-26831-2">2</xref>
                </sup>). The background literature from these papers will inform the discussion and conclusion of this study to a more acceptable position than it is now.</p>
            <p>Is the work clearly and accurately presented and does it cite the current literature?</p>
            <p>Yes</p>
            <p>If applicable, is the statistical analysis and its interpretation appropriate?</p>
            <p>Yes</p>
            <p>Are all the source data underlying the results available to ensure full reproducibility?</p>
            <p>Yes</p>
            <p>Is the study design appropriate and is the work technically sound?</p>
            <p>Yes</p>
            <p>Are the conclusions drawn adequately supported by the results?</p>
            <p>Yes</p>
            <p>Are sufficient details of methods and analysis provided to allow replication by others?</p>
            <p>Yes</p>
            <p>Reviewer Expertise:</p>
            <p>Immunity and Infection, T cell function and Immunodeficiencies</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard.</p>
        </body>
        <back>
            <ref-list>
                <title>References</title>
                <ref id="rep-ref-26831-1">
                    <label>1</label>
                    <mixed-citation publication-type="journal">
                        <person-group person-group-type="author"/>:
                        <article-title>Hematological reference ranges among healthy Ugandans.</article-title>
                        <source>
                            <italic>Clin Diagn Lab Immunol</italic>
                        </source>.<year>1995</year>;<volume>2</volume>(<issue>2</issue>) :<fpage>233</fpage>-<lpage>5</lpage>
                        <pub-id pub-id-type="pmid">7697535</pub-id>
                    </mixed-citation>
                </ref>
                <ref id="rep-ref-26831-2">
                    <label>2</label>
                    <mixed-citation publication-type="journal">
                        <person-group person-group-type="author"/>:
                        <article-title>Population-based hematologic and immunologic reference values for a healthy Ugandan population.</article-title>
                        <source>
                            <italic>Clin Diagn Lab Immunol</italic>
                        </source>.<year>2004</year>;<volume>11</volume>(<issue>1</issue>) :<fpage>29</fpage>-<lpage>34</lpage>
                        <pub-id pub-id-type="pmid">14715541</pub-id>
                    </mixed-citation>
                </ref>
            </ref-list>
        </back>
    </sub-article>
    <sub-article article-type="reviewer-report" id="report26753">
        <front-stub>
            <article-id pub-id-type="doi">10.21956/aasopenres.13997.r26753</article-id>
            <title-group>
                <article-title>Reviewer response for version 1</article-title>
            </title-group>
            <contrib-group>
                <contrib contrib-type="author">
                    <name>
                        <surname>D&#x00fc;nser</surname>
                        <given-names>Martin W.</given-names>
                    </name>
                    <xref ref-type="aff" rid="r26753a1">1</xref>
                    <role>Referee</role>
                </contrib>
                <aff id="r26753a1">
                    <label>1</label>Kepler University Hospital, Linz, Austria</aff>
            </contrib-group>
            <author-notes>
                <fn fn-type="conflict">
                    <p>
                        <bold>Competing interests: </bold>No competing interests were disclosed.</p>
                </fn>
            </author-notes>
            <pub-date pub-type="epub">
                <day>26</day>
                <month>2</month>
                <year>2019</year>
            </pub-date>
            <permissions>
                <copyright-statement>Copyright: &#x00a9; 2019 D&#x00fc;nser MW</copyright-statement>
                <copyright-year>2019</copyright-year>
                <license xlink:href="https://creativecommons.org/licenses/by/4.0/">
                    <license-p>This is an open access peer review report distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</license-p>
                </license>
            </permissions>
            <related-article ext-link-type="doi" id="relatedArticleReport26753" related-article-type="peer-reviewed-article" xlink:href="10.12688/aasopenres.12925.1"/>
            <custom-meta-group>
                <custom-meta>
                    <meta-name>recommendation</meta-name>
                    <meta-value>approve-with-reservations</meta-value>
                </custom-meta>
            </custom-meta-group>
        </front-stub>
        <body>
            <p>This is a very interesting work examining a novel aspect of intensive care medicine. The authors need to be commended for their efforts. Despite several positive aspects, I have some concerns and comments regarding the presented manuscript. Comments are enumerated in the order they appear in the text:</p>
            <p> &#x00a0; 
                <list list-type="order">
                    <list-item>
                        <p>I suggest that the authors include a separate &#x201c;Inclusion/Exclusion criteria&#x201d; paragraph into the Methods section. In this paragraph, they need to be clear about the criteria used.&#x00a0;</p>
                    </list-item>
                    <list-item>
                        <p>One of, if not the most, important comments is that the authors explain how they determined negative HIV-status. Was this always done by negative HIV testing? Which test was used? Please give specific details about this as it is key for your argumentation that you included only HIV negative patients.&#x00a0;</p>
                    </list-item>
                    <list-item>
                        <p>Methods section, Study background paragraph: Please re-phrase the sentence that participants gave written informed consent on behalf of their critically ill patients. Did you mean that the next of kin gave written informed consent on behalf of their critically ill relatives?&#x00a0;</p>
                    </list-item>
                    <list-item>
                        <p>It is unclear how the authors performed a sample size calculation for two groups if they designed a cohort study which included only one arm. This is not possible. Please clarify or omit.&#x00a0;</p>
                    </list-item>
                    <list-item>
                        <p>Please clearly describe your primary and secondary study endpoint in the Methods section (e.g. the Statistical Analysis paragraph).&#x00a0;</p>
                    </list-item>
                    <list-item>
                        <p>Table 1: In the text it is given that the CD4 count was determined between 8 and 10 am. In Table 1 it is given that the CD4 count was measured at 8 or 10 am. Please clarify. After all, why is it important whether CD4 count is determined at 8 or 10 am?&#x00a0;</p>
                    </list-item>
                    <list-item>
                        <p>Table 2: Please indicate n (%) for all summary diagnoses (e.g. Central nervous system, cardiovascular, respiratory, etc.). Furthermore, please specify 'general respiratory distress' (which is a very broad term) and 'cardiac'.&#x00a0;</p>
                    </list-item>
                    <list-item>
                        <p>Results, page 5, first paragraph, last one before&#x00a0;sentence: Please re-phrase as it is difficult to read.&#x00a0;</p>
                    </list-item>
                    <list-item>
                        <p>Results, page 5, subheading &#x201c;Relationship between [&#x2026;]&#x201d;. The paragraph suggests that you tested an association (multivariate analysis) and not a relationship.&#x00a0;</p>
                    </list-item>
                    <list-item>
                        <p>Table 3: What do you think about changing Table 3 into a scatterblot figure?</p>
                    </list-item>
                    <list-item>
                        <p>Table 5: Did you include age as a binary variable? Why is the OR below one for age? The higher the age the lower the mortality? This does not make sense. The OR (CI95%) for medical wards is not given.&#x00a0;</p>
                    </list-item>
                    <list-item>
                        <p>Since CD4 count was only determined at a single time point after ICU admission, it is unclear how the dynamics of this parameter is. Do you have data to analyse the association between CD4 count and the duration of hospital stay or disease duration before ICU admission?&#x00a0;&#x00a0;</p>
                    </list-item>
                    <list-item>
                        <p>Figure 1 simply shows that both APACHE II and the CD4 count are useless for prediction of 24-hour mortality. This could be mentioned in the text but does not deserve presentation in a figure. Please omit. Moreover, prediction of 24-hour mortality is not a common goal in intensive care medicine. From the point of view of this reviewer, APACHE II is not validated to predict mortality at this early stage of critical illness.&#x00a0;</p>
                    </list-item>
                    <list-item>
                        <p>The limitation that this is a single centre study and that it is unclear whether its results can be extrapolated to other centres and regions should be mentioned.&#x00a0;</p>
                    </list-item>
                    <list-item>
                        <p>The conclusion paragraph of the text is too low and partly not supported by the results of the study. Please rephrase the conclusion paragraph of BOTH the abstract and the main text to: &#x201c;In this HIV-negative critically ill population, CD4 count was &lt;500 cells/mm&#x00b3; in 51.5% of patients. We found no association between the CD4 count and mortality at day 28.&#x201d;&#x00a0;</p>
                    </list-item>
                    <list-item>
                        <p>Overall, the manuscript would benefit from proof reading by a native English Speaker.</p>
                    </list-item>
                </list>
            </p>
            <p>Is the work clearly and accurately presented and does it cite the current literature?</p>
            <p>Yes</p>
            <p>If applicable, is the statistical analysis and its interpretation appropriate?</p>
            <p>Yes</p>
            <p>Are all the source data underlying the results available to ensure full reproducibility?</p>
            <p>Yes</p>
            <p>Is the study design appropriate and is the work technically sound?</p>
            <p>Yes</p>
            <p>Are the conclusions drawn adequately supported by the results?</p>
            <p>Partly</p>
            <p>Are sufficient details of methods and analysis provided to allow replication by others?</p>
            <p>Yes</p>
            <p>Reviewer Expertise:</p>
            <p>emergency and intensive care medicine</p>
            <p>I confirm that I have read this submission and believe that I have an appropriate level of expertise to confirm that it is of an acceptable scientific standard, however I have significant reservations, as outlined above.</p>
        </body>
    </sub-article>
</article>
